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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|75855489, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.34
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLVKRSDSV SKETNQLGVS RRAFMKNTSL AAGGAVVGAS LFAPGMMKKA QAKSVDPEAK  60
   61 TEVKRTICSH CSVGCGIYAE VQNGVWTGQE PAFDHPFNAG GHCAKGAALR EHGHGERRLK 120
  121 YPMKLENGKW KKLSWDQAIE EIGNKVMDIR KESGPDSVYF LGSAKHSNEQ AYLFRKMASL 180
  181 WGTNNVDHQA RICHSTTVAG VANTWGYGAM TNSFNDMHNC KSMLFIGSNP AEAHPVAMQH 240
  241 ILIAKEKNNC KIVVADPRRT RTAAKSDHYV SLRPGSDVAF IWGVLWHIFE NQWEDKEFIR 300
  301 QRVFGMDEIR AEVAKWTPAE VERVTGVSEE DVYQTAKLLS ENRPGCIVWC MGGTQHTTGN 360
  361 NNTRAYCVLE LALGNIGKSG GGANIFRGHD NVQGATDLGV LSDTLPGYYG LSEGAWRHWS 420
  421 KVWEIDYEWI KGRFDDNAYS GQKPMHSAGI PVSRWVDGVL ENKDNIRQRE NIRAMFYWGH 480
  481 AVNSQTRGVE MKKAMQKLDM MVIVDPYPTV AAVMNDRTDG VYLLPATTQF ETYGSVTASN 540
  541 RSLQWRDQVI EPLFESKPDH EIMYLLSKKL GYSDLLFKNI RVENNQPVIE DLTREFNKGM 600
  601 WTIGYTGQSP ERLKAHQQNW HTFHKTTLEA EGGPVNGETY GLPWPCWGTP EMKHPGTHIL 660
  661 YDTSKTVAEG GGNFRTRFGV EFEGKSLLAE DSYSKGCEIK DGYPEFTDKL LKQLGWWDDL 720
  721 TAEEKAAAEG KNWKTDLSGG IQRVAIKHGC IPFGNAKARA IVWTFPDRVP LHREPLYTPR 780
  781 RDLVTDYPTW EDKDAIFRVP TLYKSIQEQD KSGEYPIVLT SGRLVEYEGG GEETRSNPWL 840
  841 AELQQEMFVE VNPKDANDLG FRDGDDVWVE GAEKGRIKVK AMVTRRVKPG LAFIPFHFGG 900
  901 KFEGEDLRPK YPEGTQPYVV GESANTATTY GYDPVTLMQE TKVTLCNIRK A

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle