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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|116184636, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFKPSLIAVS VITTLAGCSA LQSSEQQAVN SLANNLDIQY QVLTNHGANE GLACQDLGAE  60
   61 WASCNKVNMT LVNQGEAVNS KDWAIYFHSI RLILDVDNDQ FKISRVTGDL HKLEPTDKFD 120
  121 GFAAGEEVVL PLIGEYWQLF ETDFMPGAFV AAPNAEPKMI ASLNTEDVAS FVTGLEGNNL 180
  181 KRTPDDNNVF ANAVSRFEKN EDLAKQDVST TLLPTPMSVE AGKGTVDIAA GIALPKDAFD 240
  241 ATQFAAIQDR AEVVGVDVRG DLPVSITVVP ADFTGELAKS GAYEMSIKGD GIVIKAFDQA 300
  301 GAFYAVQSIF GLVDSQNADS LPQLSIQDAP RFDYRGVMVD VARNFHSKDA ILATLDQMAA 360
  361 YKMNKLHLHL TDDEGWRLEI PGLPELTEVG ANRCFDKQEK SCVLPQLGSG PTTDNFGSGY 420
  421 FSKTDYVEIL KYAKARNIEV IPEIDMPAHA RAAVVSMEAR YDRLMEEGKE AEANEYRLMD 480
  481 PQDTSNVTTV QFYDKQSFIN PCMESSTRFV DKVISEVAAM HAEAGAPLTT WHFGGDEAKN 540
  541 IKLGAGFQDV NAEDKVSWKG TIDLSKQDKP FAQSPQCQAL IADGTVSDFA HLPSHFAQEV 600
  601 SKLVAEKGIP NFQAWQDGLK YSEGEKAFAT ENTRVNFWDV LYWGGTSSVY EWSEKGYDVI 660
  661 VSNPDYVYMD MPYEVDPKER GYYWATRATD TRKMFGFAPE NMPQNAETSV DRDGNGFAGK 720
  721 GEIEAKPFYG LSAQLWSETV RNDEQYEYMV FPRVLAAAER AWHRADWEND YKVGVEYSQN 780
  781 SNLVDKASLN QDYNRFANVL GQRELAKLEK SGIDYRLPIP GAKVENGKLA MNVQFPGVEL 840
  841 QYSLDGQNWL TYADNARPSV KGEVFIRSVS ATGERASRVT SVK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle