YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|86163200, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRNTEHHYGW FTIGAHWLAA IMIIGLFGLG FWMVDLGYYD PWYKTGPDLH RSIGIILFVL  60
   61 MSIRLVWKLS QIQPKPLDHY TKFERVSSHL VHQLLYVLTF GIMLTGYLIS TADGRGIDVF 120
  121 NLFQVPSLGE LFADQEDIAG LIHEYAAYTL IGAVVLHALG AFKHHFIDKD ITLKRMLGFR 180
  181 NTK

Type	Start	End	Confidence
Cytoplasmic	1	9	0.90
Transmembrane Helix	10	32	0.90
Non-Cytoplasmic	33	48	0.90
Transmembrane Helix	49	67	0.95
Cytoplasmic	68	88	0.92
Transmembrane Helix	89	111	0.90
Non-Cytoplasmic	112	144	0.96
Transmembrane Helix	145	167	0.90
Cytoplasmic	168	183	0.99