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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|87120539, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFDSKKENRI PRSALDSCRL LLQLSGIKEL FSPVELSQGG LLKEILKQYG KENHCEFRLK  60
   61 RLKFADIESQ TLPIVYQQKK GEFAVLARVA DQQALIQSPD SATPDILSFE ELKSDWHGNI 120
  121 IVLQNAKQRF DIAWFIPEFV KHRRLIIEVL LFSLMLQILA LATPLFFQLV MDKVMVHQAL 180
  181 STLDVLVFIL LVVGIFEIIL KGLRDYLFAH TSNRIDINLG IKLFRHLLGL PLLYFKHRQV 240
  241 GAIITRVQEL DSIRDFLTGS MLTLFVDVLF TFVFFVVMFW LSPTLTYLVL ASLPFYFLLA 300
  301 RYSTSPLQAS IERQFQAEAM NTSFLNETVS GAETIKSLAV EPRMQRRWES QTGEMVIAGF 360
  361 KTQTLNSLVN HGVILLQKVT SVSIIWVGSN LVMELELTIG QLIAFNMMAS HVSQPIAKLI 420
  421 ELWQQFVRAR VAVDKLADML NIPVEQSLGS IIPDKPLIGQ LQLKQLVFSY QPDHPPVIRE 480
  481 LDLTVQPGET IGIVGPSGSG KSTLTKLIQK LYIPDSGDIQ VDGISLQSLD PNYLRRQVGV 540
  541 VLQESYLFNR SVRHNIAIKD PTVSLDIVIS AAKLAGAHDF ILQLPRGYDT ILAEGGSSLS 600
  601 GGQRQRIAIV RALIANPKIL IFDEATSALD DESQAIILEN MDDIARGRTV ITIAHRLSTV 660
  661 RQCDRIIVME KGQITESGKH HELLKNEGCY ARLWQLQQEL RKEPT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle