YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|116184471, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFLISTLFD LYIMVVILRI WLQAARADFY NPFSQFIVKA TQPVIGPLRR IIPSVGNIDL  60
   61 ATVLFAYVLC VLKFVVLILI ASNGSVSFSA DFLFLGLLSL IKAAGGLLFW VLLIRAILSW 120
  121 VSQGRSPIEY VFHQLTEPMC APIRRIIPAI GGLDLSVLVL FIGLQFANFL MGDIIGPIWF 180
  181 QL

Type	Start	End	Confidence
Cytoplasmic	1	57	0.65
Transmembrane Helix	58	81	0.87
Non-Cytoplasmic	82	91	0.73
Transmembrane Helix	92	114	0.88
Cytoplasmic	115	148	0.79
Transmembrane Helix	149	170	0.85
Non-Cytoplasmic	171	182	0.74