YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|75854925, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNRKPYVRE VKRTWWKNHP FYRFYMLREA TVLPLVLFTL FLTFGLGCLV KGPEAWQGWL  60
   61 DFMANPIVVA INIVALLGSL FHAQTFFSMM PQVMPIRLKG KLVDKKIIVL TQWAAVAFIS 120
  121 LIVLIVV

Type	Start	End	Confidence
Cytoplasmic	1	24	0.93
Transmembrane Helix	25	50	0.78
Non-Cytoplasmic	51	65	0.83
Transmembrane Helix	66	86	0.93
Cytoplasmic	87	106	0.89
Transmembrane Helix	107	126	0.95
Non-Cytoplasmic	127	127	0.99