YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|75854157, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHMIADLLAG FPNFLLYFSV SIIFVLAFKF IYVKLTPYDE WHLIKEKQNT AAAIALSGAF  60
   61 LGYCIAISGA AKNSVNIVDF MVWGVVAMLA QIIAFAIVRF VLLPKVTERI EKDELPAGIV 120
  121 LAAVSISVGV LNAACMTY

Type	Start	End	Confidence
Non-Cytoplasmic	1	13	0.82
Transmembrane Helix	14	33	0.94
Cytoplasmic	34	49	0.92
Transmembrane Helix	50	71	0.92
Non-Cytoplasmic	72	79	0.86
Transmembrane Helix	80	103	0.92
Cytoplasmic	104	114	0.94
Transmembrane Helix	115	136	0.89
Non-Cytoplasmic	137	138	0.83