YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|171990577, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRRVQLLMT LLLTVSLIGF LSYYWSVYMV GWLSIVIILV VLSVFVIILL ENRNPERTLV  60
   61 WALVMMALPV VGVFVYFTFG QNYRRKKMFR LKAMLDEESY IKYRTQFDHG IHNQVFQHGH 120
  121 YTKVVKLIDS ISRLPISYNS HTKVLTNGQE KFPLLLAEIR QAEHHIHLEY YIVRDDELAL 180
  181 ELQEALIERA KAGVEIRFLY DAVGCFSTDK SYFKKMELAG IEVRPFFPVV LPFISSKSNY 240
  241 RNHRKIVVID GTVAFTGGIN VGDEYMGKDK MFGFWRDTHL LVRGEAVSEL QLIFLQDWYY 300
  301 MTGERLFTPY YMKPLEVMEE STGGVQIIAS GPDEPHETMK SLYFGLITEA RSSVYIASPY 360
  361 LIPDEDLMTA LKTAAMSGID VRILLPSFPD HKVVFYASRS YFDDLLLAGV KIYEYNKGFM 420
  421 HSKVIVVDDA IATIGTANMD LRSFHLNFEV NAFLYGTNSV HELTRDFYED FSNSSQVERQ 480
  481 VFIQRSFGQR LIESISRLFS PLL

Type	Start	End	Confidence
Cytoplasmic	1	6	0.91
Transmembrane Helix	7	25	0.94
Non-Cytoplasmic	26	30	0.73
Transmembrane Helix	31	50	0.95
Cytoplasmic	51	58	0.89
Transmembrane Helix	59	80	0.95
Non-Cytoplasmic	81	503	0.99