YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|68008305, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANHRDFVGR KIHSLLGVIP IGLFLLSHFT TNYFIVRGEE DFNKAAEVVG SVPYRLFLEV  60
   61 FVIFIPIILH GIYGVYIAFT GSANTGRYTY FRNWMYVLQR FSGIFLVVFI TWHVWETRIA 120
  121 AAMGTEVDAS MMQNIVDNGF MLAFYIVGIL ATTFHLANGL WTFCITWGIT QSPASQKAMS 180
  181 YVAALVFIGL SFVGVRSILT FAGVL

Type	Start	End	Confidence
Cytoplasmic	1	11	0.89
Transmembrane Helix	12	31	0.91
Non-Cytoplasmic	32	59	0.84
Transmembrane Helix	60	80	0.90
Cytoplasmic	81	95	0.84
Transmembrane Helix	96	115	0.94
Non-Cytoplasmic	116	140	0.92
Transmembrane Helix	141	165	0.87
Cytoplasmic	166	178	0.84
Transmembrane Helix	179	200	0.92
Non-Cytoplasmic	201	205	0.74