YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|75831029, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWHTMTRPAV HISLGVLTLG GFIAGVIFWG GFNTALEATN TEEFCISCHT MRDNVYQELQ  60
   61 TTVHWKNHSG VRATCPDCHV PHEWTAKIAR KMQASKEVFA QIFGDLDTPE KFEERRIELA 120
  121 KHEWDRFAAN KSLECKNCHN YESMDFDQMS ATARIQMKQA AERDQSCIDC HKGIAHNLPK 180
  181 NMESSSGLIG ELEGMASNTK YSNGETLVSV RFLPVYEDDQ AKVEAGLLNP ASEVKVLTEK 240
  241 GDMMQVEING WRKSKGFGRV IQEDFGMNIA VASLLKEAAM SDAIVTTGEQ KVDDMTGLPW 300
  301 EQVSAKVWMK KEAMLNDINP VWEKAREAYK TNCSVCHTQP DEAHFDANTW PGMFDGMLAF 360
  361 VNFDTDSEAL VLKYLQKHSS DFAEGHH

Type	Start	End	Confidence
Cytoplasmic	1	9	0.90
Transmembrane Helix	10	32	0.92
Non-Cytoplasmic	33	387	0.97