YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|68054223, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKITVAGTGY VGLSMAVLLA QHNEVTSIDI IKERVELVND RKSPIVDAEI ENFLQNKELN  60
   61 LHATTDNFEA YKDAEFVIIA TPTDYDPTRN YFNTRTVESV IATVLAINPD ATMVIKSTVP 120
  121 VGYTQELKEK FDTPNIIFSP EFLREGQALH DNLYPSRIVV GEQSERAQQF ADLLLEGAIK 180
  181 KDVPILLTDS TEAEAIKLFS NTYLAMRVAF FNELDTYAEV RNLDTKQIIE GVGLDSRIGN 240
  241 HYNNPSFGYG GYCLPKDTKQ LLANYDEVPN NIIGAIVEAN RTRKDYIADT IIKQNPKVVG 300
  301 VYRLTMKTDS DNFRASSIQG IMKRIKAKGI EVTVFEPVLT EDTFYNSRVI RDLEAFKQES 360
  361 DIILSNRMHS ELSDVEDKVY TRDLYSRD

Type	Start	End	Confidence
Signal Peptide	1	20	0.77
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	388	0.99