YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|172057712, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTAISDFFVA AFALIGAFFS LVTALGLIRL PDLYTRAHAA SKSATLGVMS ILISVIIYFV  60
   61 AEDGFFSSRV VLGILFVLIT APIGGHLIAR AAYYSDVPLW KGSVQDDLAK NPEHVTPKKR 120
  121 PAPKLK

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.79
Transmembrane Helix	7	28	0.94
Cytoplasmic	29	38	0.69
Transmembrane Helix	39	61	0.88
Non-Cytoplasmic	62	69	0.64
Transmembrane Helix	70	89	0.94
Cytoplasmic	90	126	0.76