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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71540913, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIPYTANNEE LLNQLQVNPD KGLSSTEASK RLTEYGENKL QAKKKKSMLQ RFLEQFYDVM  60
   61 ILILILAAAI SFVVACYEGE GFYEPVLILL IVVLNAILGV VQESRAEKAL ESLQELSAPH 120
  121 ARVIRDGKES IIEASFLVPG DIIKLEAGDS VPADARLIHS SSLKSEESAL TGESVPSEKD 180
  181 AAAEVAANAP LGDRFNMVYA GCSITYGNAR AVIIATGMNT EIGRIANLLD AANDRQTPLQ 240
  241 HRLAVLGKYL GLMALGICAV IFIIGLINGM KVMEIFMIAV ALAVSAIPEG LPAIVTIVLA 300
  301 IGVQRMVKKN AIIRRLPAVE TLGSASVICS DKTGTLTQNQ MTLVKAFADG ASVLEDIGES 360
  361 NSAVIKKLLQ YSALCCDGTV EFEDGKERHI GDPTETSIVL AAHKNNLPKD ELNRLYPRLA 420
  421 ELPFDSDRKL MTTVNQIDGK YMVIVKGAFD VLAARCIAGD LEAARRFNNE MSRQALRVLA 480
  481 VAYKEIETLP ETASSEELEK DLIFMGLLGM IDPPRPEARE AVAVCRRAGI KPVMITGDHV 540
  541 ETASAIAKDL GIMLEGDKAI TGSQLANLSD SELDEQVRQI SVYARVSPED KIRIVQAWQH 600
  601 QGEIVSMTGD GVNDAPALKA ADIGCAMGIT GTDVAKGAAD MILTDDNFAT IVDAVKEGRG 660
  661 IYDNIKNTVG FLLGTNVGEV LAVFLAMILW KASPFLAMQL LLINLVTDGL PAIALGMEPV 720
  721 ESDVMERKPK PKEESIFAHG MGTRIILQGA MFALLTLIGF FMVWQITGDI VAGRSMAFLV 780
  781 MALSQVIHSF NMRSNHSLFK TGIFTNRYLN GAAFISLALI ALVAFLPPVA FAFGLTQLSA 840
  841 AMYLYALALA LVPVVVLEFS KAFGLVKHQA 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle