YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|75828111
Protein type:	Globular with Signal Peptide
Type Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFIKKTLAS FGIGSAKVDS VLQQEVLYPG QSVKVIIHVY GGATAQVIDN IELKLCCCYI  60
   61 AEVADERGQQ QGQPMRRVPH TYTLANWSLP YAFTIEAGET RNFDIELSIP WNTPVTIGDA 120
  121 KVWLETGLDI ALALDPTDKD ILTVRPEPMM DGIFSALEAQ GLRLRQVECE QAKGFALPFV 180
  181 QEFEFVPTTG PFQGRWREVE IVAYRDPEAL QLWFEVDRYQ RGASGMLASL LGRGELKRHL 240
  241 TLPARTSPQE AGEQVLAFLD RSC

Type	Start	End	Confidence
Signal Peptide	1	20	0.60
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	263	0.99