YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|116188743, gi...
Protein type:	Transmembrane
Type Confidence:	0.78
Topology Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHKRITITLV WLIIVFIAMF GVYRFEKPKK FKLPLLRGEV VGAAPDFSAI HDIAERKEAF  60
   61 FNYLKPGVRY ENSRILQERT LLKRIKKDFA DGQLSSHNLA QAQHLATAYS VALTENNVDN 120
  121 AWLQEMFHRV DVVPEALVLT QAANESAWGT SRFAKEANNY FGQWCYSAGC GLVPLARAEG 180
  181 AFHEVAKFDS VQDSIQSYFM NVNRNPAYRE LREIRFQLRQ QKINPNSDES AKAMSNGLLK 240
  241 YSERGEAYVR DLQAMMLANQ EYWNDN

Type	Start	End	Confidence
Cytoplasmic	1	6	0.52
Transmembrane Helix	7	25	0.74
Non-Cytoplasmic	26	266	0.80