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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|86196687, gi|...
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRWSPTFLLG LGGLLGLGIT YSRSGMTKSY STTHARTPAK MGSWTGFVLT YLFGGITFLP  60
   61 LLLLVVFVHG YLTFPDRPDL DPRTAAASGA DDGQDDIVQP GDDIATLKAA QKLSREETRA 120
  121 RASQNDSDVA AGYFAVCREY EPMGINAKPI ERATPVGSAT VAAPSQSVYQ AMYRTIFDRK 180
  181 QAAGPLDGKN GTSQRPRKAG NVFYVVLRHG HIMLFDDDEQ LEVRHVISLA HHDISIFSGE 240
  241 DSPTPEGELY IKKNAICLTR KEGGLDATAP DAQLSKPFYL FSENCSAKED FYFSLLRNQK 300
  301 QSFRGEQAGV DAPTPMQYDV KHIISLVQKL HSSEDHLPTR WLNGMIGRVF LGIYRTKDLE 360
  361 NLIREKLTKK ISRVKRPSFL SNISIQRIET GDSAPYITNP RLKDLTVEGE CGVEADIKYT 420
  421 GNFRIEVAAT ARIDLGSRFK AREVNLVLAV VLRKLEGHVL FKIKPPPSNR LWFSFQTMPK 480
  481 MEMTLEPIVS SKQITYGVIL RQLESRIKEV VAETLVLPFW DDSPFFNTEH KKWRGGIFEG 540
  541 DDAVVSSADL ESLAAQLGAV DEVEKSEEQS TTQAAQSTSD LPPMEKSHSL PVLEQTSTTT 600
  601 GALFGQKSST STKSKSSGHS KRGSISSTNT ETRPQFPPRP SRSGSITGPS SPVVSTDTVN 660
  661 SDIFKPSSSP PYESAAAQAM AHLSARSAAL GTSPPDSRPA GPASKPSNSS HVSVASSRDG 720
  721 TDSEKDRNFL DATPRPDRRH TVSSTNSGKS DEDDGSPAAS IKSNLRAQTG TLTRNFFLRH 780
  781 KTSTESLAAV GGSGTGDTPK RNAMEAIATA ATVAKRWGLN ALQRNASDAN GVGGKSEGGL 840
  841 CRRRGPPLPM PDKNSKVTSI PVPQPKRRPI VPPPQLVHPG EQQGSGSNNS SQDNVSRRGG 900
  901 MQRKTVPPPL PKRRHAQQNN DSPSRANGDM MLVVEAPADS EPTSPMSATS SDGGAGRTGY 960
  961 RRPWAEVEGD EAYEEPSRGR SRSSQRRQGA QDVDDDEGVS AWMDDGDAVE EELAQPPKPP1020
 1021 KLPQRSMLAQ LGVAAK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle