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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|86196347, gi|...
Protein type: Transmembrane
Type Confidence: 0.63
Topology Confidence: 0.48
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANPRVEELP DEEVKKTVVD DHDDDSSSDS DGEEETNLPA GSTAVIHSRN EKKARKAIEK  60
   61 LHLIRVDGIT RVTLRRPKNI LFVINNPEVY KSPNSGTYIA SCYGYCAPAL YLFSHTICYF 120
  121 AMSLKWYLRA SISYVGCIYR SDLSFKMAWT LVDRSRDKWI TLAGLSEFAV GTSASIIATT 180
  181 TTSFSISTPP NTHINRKNGR TLKIDWAQVT TSLGLRGQTA ASLQAFKKRN DDVRRKVQQL 240
  241 SQQSTQVDFA HYRSVLKNQA IVDEIEKRFA AFKPATYDVS RQLKAIDAFE VEAVKNAEAT 300
  301 KNQVDMTLKD LQKTLENIET ARPFEDLTVD EVAAAEPSID EKTAKLVSKG RWQVPGYKAN 360
  361 SRVLTVRLMI IVRFCFSTKL SVKSIHILLE QLPSTYQVSQ MATRQVPDSL ILKTAPQLDP 420
  421 AWVAYEQSDT PFTPPDDILE RQKWYAERCR SRHASIISPG MPDHHLTQDV ATRWLEVPTS 480
  481 NSDEDHKIPI LQYTSPRSTA APKTVVVYYH GGGLFVGEAD SEDLSCRKLA KSPCVDVVYS 540
  541 VGYRLMPTHP ASVCVSDALD AFRHVAGDLH RDARVLVVGS SSGGELAALV AQAAAVSASR 600
  601 DGALLQGVLL RGPVTSDAFT GLDPYVPESV RHMHTSVDEP SFANSMLRPW KRAVPRDGLP 660
  661 LMPLEAGDEV LRAMPRTWVQ VCTNDVLYSD GVCYARRLDD CGVDVRVDVV VGWPHTFWLK 720
  721 APELERARKA DDEMLEALAW VCQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle