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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|75827509
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNHFALALRG LNCMGCARKL ERQLNQDLTV EIETLTPTSI ELHTHATLNE VLTSIESLGY  60
   61 QGGTEQTYQL QGLNCGRCVN KLTTHLSAQA EIAKLHVSKE RLSLVTTLTA EQVKALVAEV 120
  121 GYQAIEAEQE STFAPAASID EKETDTPDAE NSSNTEATEA SSQTLSLLIK GMTCASCVAS 180
  181 VEKALLSVEG VQSAQVNLTE QSALVRGIFA NPQPLLNAIQ SSGYQAEILD DPAQQQAKQQ 240
  241 AQLEALQKEH KQSALLGIAL GTPLMLWGVF GGNMMIRNSS DQMVWGGIGT ICFALLLTAG 300
  301 RHFFMNAWQA LTHGRATMDT LVALGTGAAW FYSMLVVAWP QTFPDAARHV YFEATAMIIG 360
  361 LISLGHYIET KAKSNTNRSL QALLNLQPQQ ATLVTEQGDQ SIAVADIQLG MSLRIKPGEQ 420
  421 VPVDGVVSTG HSYLDESMLT GEPIPVLKEA GAKVAAGTLN QDGSLVITAT GIGAQTMLAR 480
  481 IIQMVRQAQS SKPAMARLAD QISSVFVPVV VVIAILSAAL WYLYGPDPKA SYMLVVATTV 540
  541 LIIACPCALG LATPLSITVG IGKAAEMGIL IRDANVLQTA SQVDTVVFDK TGTLTLGKPS 600
  601 IQSLHVLQGD ENQLLALAYA LEQQSEHPLA KAICDYAKQR NISPVEISQF TNQRGRGLLA 660
  661 DYQNQTVLVG SLAFMQEQGI DLSMAESTLE KFAAQAWTPV AVAYRGMLQG VLAIADPIKP 720
  721 TSAQAVRKLN ELGIHTVMLT GDHTSVANAI AKELGISQVI AQVLPDQKAQ HIQALQQQGR 780
  781 KVAMIGDGIN DAPALALADI GIAMGSGSDV AIESAQMTLL NSSPTSVVSA IELSKATLRN 840
  841 MKQNLFGAFI YNTLGIPIAA GVLYPAFGFL LSPVVAGAAM ALSSITVVSN ANRLRWSKIS 900
  901 FDQHSQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle