YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|75827249
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEQSWFSRVG QFTDSIEEFL IAFFMGAMTL LTFANVIMRY LFNDNILWAL EGTVFMFAWM  60
   61 VLIGASFGVK RHFHIGVDVL INIAPARLRK LYALVAVACC LAFSILLLIG SWNYWYPFIS 120
  121 ERAWYETDDI PMPEMLQFLA DWFNEGERYE KLPRFIPYAA LPIGMALLTF RFLQIAWQIL 180
  181 TGKLDRMIAG HEAEEDLEAL KAELSEAGEA MMPKTQGKEK

Type	Start	End	Confidence
Cytoplasmic	1	18	0.96
Transmembrane Helix	19	41	0.90
Non-Cytoplasmic	42	47	0.82
Transmembrane Helix	48	69	0.90
Cytoplasmic	70	90	0.89
Transmembrane Helix	91	112	0.93
Non-Cytoplasmic	113	155	0.95
Transmembrane Helix	156	177	0.85
Cytoplasmic	178	220	0.95