YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|116217851, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVMSKTVDV VIIGAGAAGL MCAAQAARRG RQVLLLDHAK KPGRKILISG GGRCNFTNYD  60
   61 VSAANYLCQN PHFVKSALSQ YTNWDFISLV SKYGIAFEER DHGQLFCLDS AKEIVDMLLS 120
  121 ECNQPNIEQR YQVEISAIAH TEQGFTLQTT IGEIECASLV VATGGLSMPK LGATPFGYKI 180
  181 AEQFGLPVIS TSAGLVPFTL HVQDKEDFAP LSGVAIPVEM RAECGKTFKE ALLFTHRGLS 240
  241 GPAVLQISSY WTPGQTITTN LVPDVDLAEL LSSEKEAHPN QSLKNTLSKV LPKRLVEVLI 300
  301 ERQLFADKPL KQYSPKELDA VQTRLEQWSI VPNGTEGYRT AEVTLGGVDT DCLSSKTMEC 360
  361 KTVKGLFFIG EVMDVTGWLG GYNFQWAWSS GYVAGQWV

Type	Start	End	Confidence
Signal Peptide	1	26	0.96
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	398	0.99