YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|75824291, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKHSRTGLSR IIYATGYSMK GFAAAWKNEA AFRQEVTLAL PLIALSFFLP VSTIEQVLMV  60
   61 GSLVLILIAE LLNSAIEAVV DRIGAERHEL SGRAKDIGSA AVFVALCFAA FTWGIILFNT 120
  121 YTQTT

Type	Start	End	Confidence
Cytoplasmic	1	35	0.72
Transmembrane Helix	36	54	0.73
Non-Cytoplasmic	55	56	0.65
Transmembrane Helix	57	80	0.76
Cytoplasmic	81	96	0.88
Transmembrane Helix	97	117	0.94
Non-Cytoplasmic	118	125	0.77