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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|67987421, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLGPDVRPLG GDAGLTGQGA HVPALVGGGD GDDEAAGAGA GGAPGAVQVG LVLGRGVDVH  60
   61 DEAHVVDVDA AGGDVGGAEH LDRAVGERGE VALAGVLAEV AVQVHGRDPG RGELLGELLG 120
  121 AVLGAGEQDG AALPGGELAH QGVLAVGADL EDVVLHGRDR RDGRVDGVHD RFGEVALDED 180
  181 VDAVVQGGGE QQALAAGGGG VEQALDPGQE AEVGHVVGLV EDGDLDGVEV AVALADEVLQ 240
  241 PAGAGDEDVD TLAQRADLRV LPHAAEDDGG AQPQGLRQRG DGGRDLVGQL ARGHEDQRAR 300
  301 PAGAAGAGGG RDPGDEGQRE GDGLAAAGAP APEHVAPGHG VGQRRGLDGE RADDAGGGEH 360
  361 VDQGLGHEEV GEGAAVGDDL HPGVGDDLGG GGALGGDGAG GGLGRGDAGG AGGARAAGAA 420
  421 ATARVGDRAL AAGGGAGRAG AAGRGRVHRG PLGGRARREV AVVLDRTRRP GGRARDLRAA 480
  481 LPGPALNTRP RTPGRPPTTT LPTAAPLHRP RPPGSEPRAR SRPQGGEANL TSVSSSTSAP 540
  541 PAATAPAGRA PARRRRSRPT ALLLACALLV VAVLASLAVG SREVPLGTVL DALRGIGADS 600
  601 QDALVVRELR VPRTLVGIVV GIALGLSGAL MQALTRNPLA DPGLLGVNAG AAAAMVTAVA 660
  661 VLGLTSRLQL VWASMLGAAV VSVLVYVLGA TGRGGATPVR LALAGTAVSA ALHAYTTAQV 720
  721 LLDTTTFDRF RFWQVGSLAG QDATVLRQLL PFFAVGTVLA LSQARALNAL ALGEDSGRAL 780
  781 GASTTRTRVI AALAVTLLCG AATAAAGPIA FVGLAVPHVV RALTGPDQRW VLPLSCLVAP 840
  841 ALLLLGDVLG RVVVRPGELE VSIVTALLGA PVLVALVRRR RLAQL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle