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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|69287966, gi|...
Protein type: Transmembrane
Type Confidence: 0.92
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRWVRPDFTT SAHSTALRRS DASRWRSAGT SSLTTAEVAA TCTEVGKTSL EDCEALTWSL  60
   61 GCTGEPKRSV ASVAMTSLAF MLELVPEPVW KMSTGNSASQ RPVATSSAAS ATARARSSAR 120
  121 TPSSALASAA AFLIRASASM WARSRPVPDS GKFSTARCVC ARYFAAAGTL TSPMVSCSMR 180
  181 NSARGSGAGA SVTMGPSCQG PRPGCADGRQ ITLRSRSDET SATRDLPDGV ARGGGVGMAN 240
  241 ERDARTAQTS VQTIQTTTSR RSGGRQDVRK VAPTRGRGGG RRRAGRLADG VRGRIGGDGD 300
  301 ADPELVHQPR QRRAAEDRRG LQRRLRRRVL DRGVDPPQRR RPAARAAHAP PRRRGHLDRP 360
  361 HEPGPGLRAG DVGGGVPRPR ARGPAGHLHR RGRGRCRPGR DVEGRARRRP VLGQHPAALV 420
  421 PQVRRRGRGP GHDEAGDLAA AHRGGAGPGH RHRRPGPARG VDDGVGQRDD CLRRGRGHRE 480
  481 PRRQGPRHPP RDRLRGGEGG RRGDAADRRR RGGGPGHRQP RRGGHGQPVP AGGRGVHGEL 540
  541 ALRLRPGQGR RRGRHDGPGG LRRLRLDDLP GDGRGHPGGP AAGRHRHRRQ RVLGEHRRGL 600
  601 RGAAVHRVGG EPGRLHGLGR EPGRAGVGLR RPRGAGGVPD VRRHPHVAAG RRAATADGVL 660
  661 QRGQPGHRRP VAAGLQRLRP HPVGLAGVHR ASAQGGEAAV SATTTPRAAG ARPAAGKPGK 720
  721 ARSSDKARAE AKLGWYLAGP AFVILVAVTG YPILQALYES LFSYRLTAPG DREFIGLRNY 780
  781 GVILTDSLWW EAMVNTVLIT VVTVAIELVL GFALAMVMHK VLGWLRPIVR TAILVPYAVI 840
  841 TVVSAYAWQY AFALTTGFMN SVVPGVGEDF DWFANKWTAL LVICLSEIWK TTPFISLLLL 900
  901 AGLAQVPSDT IEAAKVDGAT AWERLWRVTL PNMKASIMVA LLFRALDAFR IFDNVYIMTQ 960
  961 GAAGTQTVSA LAYNQTISRL EIGLGSAVSV LLFVCVLVIC FLAIKVFKVD LARARGEG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle