YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|116215741, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKVMKKLFA LVATLMLSVS AYAAQFKEGE HYQVLKTPAS SSPVVSEFFS FYCPHCNTFE  60
   61 PIIAQLKQQL PEGAKLQKNH VSFMGGNMGQ AMSKAYATMI TLEVEDKMVP VMFNRIHTLR 120
  121 KPPKDEQELR QIFLDEGIDA AKFDAAYNGF AVDSMVRRFD KQFQDSGLTG VPAVVVNNRY 180
  181 LVQGQSVKSL DEYFDLVNYL LTLK

Type	Start	End	Confidence
Signal Peptide	1	23	0.99
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	204	0.99