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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|67984923, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGQLRRRLGH DPAGRARRHG LAGRDRPAAR RPRRRDARQR RRRPRGGTRR LPPAAGEERA  60
   61 PAGRAHLRHR RLVHALRDHG PARPHRRLAE PGRRARPLRP PGPREHRLRQ PPAERAGAGG 120
  121 RRVPDPQQPA HRARRRDRHD DRPGPVRPPV ATGPRGPRGV AEPRGRRAHG GQPEARRPVD 180
  181 VLHRRPHGRC RGAALPRPHR GHPLQRRLHP RHQGLHRGRP RRHRQHPRRA RGRARPRPGR 240
  241 ELRHVLRSRL VLEGRRVLPA ADRRPAVPAH RHPRRIPREG PRMSTSATAA KPARPAKPSF 300
  301 ADRWTALPKP VQVLVWVLLA LFFFVLPLLN LPIVSTPDAE FGSVLASVAN YALVALGLNI 360
  361 VLGYAGLLDL GYVGFYAIGA YTVGVGGSLH GEINWFVLII MAVTISTASG LLLGAPTLRV 420
  421 RGDYLAIVTL GFGEIIRLTA LNTEWLNQAR GITGIPRPPS TELFGLPSLV WDGATAKVDL 480
  481 GEGARSIFLK FGLLDAVPYY WLALIVIILV LIADKLLQAS RVGRAWEATR EDEEAAELNG 540
  541 VPTFRFKLLA FAMGAFVGGL SGALYASRIG AINPDSFMIQ LSMMFLAAVV IGGQGNRWGA 600
  601 IVGGVVVAYL PERFREFADF RIVVFGLLLL LLANFRPQGL LPPRRAKRAQ RADAATQELE 660
  661 GTQEGARA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle