YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|118413733, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADEAKTTEG GSKKSPVVLI AIVGVLVFLL IIGALVAFML VGSSSEQKME ANQAPNSTQQ  60
   61 QAAPSPKQRS NDFFNVGPMY PMDQFLVNLL SESGSRFLKT TLNLELSEQT LSPEIDKKKP 120
  121 LIRDIIIRTL SSKTYEDVST SKGKERLKDE LVTKINEILR DGYIKNVYFT DFIVQ

Type	Start	End	Confidence
Cytoplasmic	1	16	0.85
Transmembrane Helix	17	41	0.91
Non-Cytoplasmic	42	175	0.86