YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|116220886, gi...
Protein type:	Transmembrane
Type Confidence:	0.57
Topology Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFDIGFWELV LIAIVALVVL GPERLPHAIR SVAKFVSAAK SMANSVKDEL AHELKVQELQ  60
   61 ENLRKAEQMG MQNLSPELQK SVESLKQAAQ EVQRPYAATP SSEASSTSSN PCSATEPDVR 120
  121 RDSAPQSAEK KAE

Type	Start	End	Confidence
Non-Cytoplasmic	1	5	0.53
Transmembrane Helix	6	25	0.51
Cytoplasmic	26	133	0.50