YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|116220487, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKTTFTLAA ASLILVSYSA SSADDTRIRL ATTTSTYDSG LLDYLLPKFE QDTGYKVDVI  60
   61 ATGTGKALKM GENGDVDLVM THAPKAEASF VEAGFGVLPR KLMYNDFVVV GPESDPAKIA 120
  121 DEKNIAKVFE NIAKSGAVFI SRGDDSGTHK KELGIWAQNK IEPNFGGYRS IGQGMGPTLN 180
  181 MASEMQAYTL TDRGTWLAYN NKLALKILFE GDEQLFNPYQ VIIVNPERYP TTQYQAAKVF 240
  241 SDWLVTPKGQ QLINEFKVNG QQLFVANADK Q

Type	Start	End	Confidence
Signal Peptide	1	22	0.99
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	271	0.99