YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|86147431, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNPLSLISL KNPWHLLATG FGSGLSPIIP GTMGTLASIP FYLLLVQLPF PAYVAVVVVS  60
   61 CIIGIKICQV TSDDMGVHDH GSIVWDEFAG FWITMGLVPL LNIPTDDWKW LFTGFVLFRF 120
  121 FDMVKPWPIG WLDKRVHGGL GIMIDDIVAG IMAAVALYAV AHFAGWLV

Type	Start	End	Confidence
Cytoplasmic	1	13	0.90
Transmembrane Helix	14	37	0.84
Non-Cytoplasmic	38	48	0.62
Transmembrane Helix	49	70	0.86
Cytoplasmic	71	82	0.84
Transmembrane Helix	83	103	0.84
Non-Cytoplasmic	104	109	0.70
Transmembrane Helix	110	129	0.59
Cytoplasmic	130	141	0.57
Transmembrane Helix	142	165	0.84
Non-Cytoplasmic	166	168	0.64