YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|86148645, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKKSNTGFK RIVKAAGFSW QGITSSFKNE AAFRQEVFMA AVLIPLAFYL NVNQVERILM  60
   61 ISAVVLVMVV ELINTAIEAV VDRIGSEHHE LSGMAKDVGS AAVFICLVLA GYVWLEILFL 120
  121

Type	Start	End	Confidence
Cytoplasmic	1	31	0.80
Transmembrane Helix	32	50	0.79
Non-Cytoplasmic	51	57	0.61
Transmembrane Helix	58	77	0.89
Cytoplasmic	78	97	0.63
Transmembrane Helix	98	118	0.89
Non-Cytoplasmic	119	120	0.72