YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|218321925, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNWLDFVILG VIGFSAVISL VRGFAKEALS LVIWFGAFFI ASQYYAKLAM YFTNIEDEMF  60
   61 RNGTAIAALF VATLVVGALV NYVIGQLVQK TGLSGTDRIL GVVFGGLRGV LIVSAVLFFM 120
  121 DAFTAFPSSE WWKNSQLVPE FSRIIAPFFE HLQATSSFLS GAL

Type	Start	End	Confidence
Non-Cytoplasmic	1	5	0.77
Transmembrane Helix	6	24	0.90
Cytoplasmic	25	30	0.69
Transmembrane Helix	31	49	0.90
Non-Cytoplasmic	50	63	0.76
Transmembrane Helix	64	85	0.93
Cytoplasmic	86	99	0.80
Transmembrane Helix	100	123	0.86
Non-Cytoplasmic	124	163	0.82