YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|86148331, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSWMKFASL LTLAGLSACS ASPTGRNQLL LFSDKDMSQL GAQSFEQMKK EQPISKDAKT  60
   61 NAYVQCVANS ITQYIPKQGF SEWEVVVFDS DQVNAFALPG GKIGVYTGLL KVAVNQDQLA 120
  121 TVIGHEVAHV LADHSNERLS QSQIANTGLS VTSIALGTSE YSQYQGMTMA ALGLGVQYGV 180
  181 ILPYGRTQES EADVVGLEYM ARAGFDPNQS VDLWQNMAKA SGGNQPPELL STHPSHSTRI 240
  241 KDLQATIKTL PQSGSPRPNC KT

Type	Start	End	Confidence
Signal Peptide	1	21	0.99
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	262	0.99