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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|86145818, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDGLMLSLN RFVLSLIIGL LVWSLVIRSV NAAEVTDAKL NQWLENQPTI TFIALSDHYP  60
   61 YSFIDDDGLV SGIIKDWTLD LEQRFGVHVR FITVNSRVEA KAALVDGRGD VFPFQQFDPS 120
  121 EGGRFLASDP YIPYQVAVIV PIDKKLDGNL DQNNKRRIAM VNENIDLERA GVRLSSIERV 180
  181 DFENVIDAVR ALGSGDVEGM VGEPITTMDL AKKIGVHDLA VNYVLEHWKK LEASMVIRND 240
  241 EPELLTLINK QIETFDVANK NQILSKWLDT SPYRVPLKGV FGFGNPPYMY PDSTAVGLEH 300
  301 DIIQRALNDM GYKLGDVVTL PPSAARKAID NNNSIAFVSG VQFDDPNAHF LSDKVLNVEF 360
  361 VPVSLTRRKL KLESQNDLSL GALLFDETSP IKKSVEVLKG KLDIGRVEDY EGLESAFSQL 420
  421 RAQNVDLLMV ERRVLEWFIT NTRFIEMAEL TLHDEYKVEY PIYVDFKSEE IRDSFNAAIN 480
  481 NLKQADDGLS QIIEMQVQND LSQVLKKANI IAQISAYFIV NDRFEELTEV FEIFDTDSSF 540
  541 QVITAQADNS NRPIKSWYIG NLVDEYGEKK NTSHFSSVTK VANYRTKGGS TNSGSMTFYF 600
  601 DVQSLERNHV YFPSVEQFSS FGDAAKRYIA DVYQASNLTG EILNLSQKER KWIKDNPDVR 660
  661 IGIDPNSLPY EAVSNTGEYI GMIDDYLTLI EQKTGLSINH VDVASWSETR SLVDHHEVEL 720
  721 VSAAQENRSL GDNVKAVKSL FSSRLAIASR RDISSLVLEE AEGWKIGILK NAANTDAIVG 780
  781 KYPNIEWVKV ESTEDGLNRL DDETLDGMID TVEVLNYLID SFGHREVGII GRLDFFLSPT 840
  841 LHVIKSEPLL YSIVNKAIES ISAEERQKIS AKWAAPKAIE RVDYELVYTI SGFALVIVLL 900
  901 IVFWNRKLSK QISIANDATE ALKKAQEQLY NMLNSSPIAA SVVFEEKVRY ANDTAKRLFG 960
  961 VEGLDLDSID VDSIHDSLSV RDDVHKELML NGKVVNRELV LRKPDGTRFV ALVSYYLFEL1020
 1021 DGEIATLFWA FDISEMKRLN EQLEEEKQRA DLASQAKSEF LANMSHEIRT PMNAIIGLSY1080
 1081 LAIGEISNPV ARNYIEKVHR SGHSLLSIIN DILDFSKIEA GQLVIDSIPF DPVTTFQDVI1140
 1141 ELMEPKANEK QLNLSMSIDP ELNTPLIGDP LRLFQVILNL VGNAIKFTET GSVSLTVALV1200
 1201 ESDDNSLTMK VMVADTGIGI SDENLHKLFE AFSQADSTTT RRFGGTGLGL NISQKLVRAM1260
 1261 GGQISVGSVF GQGSEFSFVL TLPRSSVEEL AEFKAQELQL DYQIEFKGQK VLLVEDNELN1320
 1321 QDLALAFFTR SNLNADLAEN GKEALELAQS NEYEMIFMDL QMPIMDGFES TRLIREFDKD1380
 1381 VPIIAMSANV FADAKQRARE AGVTDFLDKP IIIDKATSLI TKYIVPEVLV EGKASSESPL1440
 1441 VRVQDSSSNS STLSSDTLMV LPVFSLPRFG QLTHHDVKLQ EKMLGRFCQG APDIMSDTFD1500
 1501 NLVQDEWVTL ERNLHTLKSM AASIGGLQLA EQLGGLESKA HNKACDEQDL KQAELGLIEL1560
 1561 IKTVESSFDG SGAQGVETAC TQETEVRSAD ASNSPNITQE QRAKLYSLLD AYDNDATQYV1620
 1621 TELLAQYPYS AVLKDVQSAL DNYDFERAKE VLSASE

YRC Informatics Platform - Version 3.0
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