YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|86147136, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFLKKTLAS FGIGSAKVDS VLQQEVLYPG KKASIIVHVY GGAQPQEIDN IDLNLCCRYV  60
   61 KEVTANSQGQ EGGHKRRMHQ TYSLAKWSLP YAFVIQPGET RDFECEFDVP LNTPVTIGDS 120
  121 KVWLETGLDI AMAIDPSDKD TLTVRPDPLL DGIFNELEAQ GLRIRQVECE AVKGFELPFV 180
  181 QEFEFVPTTG PYHGRWRELE VVAHRDETEL KLWFEIDRNR DGAKGMLASL LGVGKLQRQL 240
  241 SVPLDTSPQD AGKMVLEYLD NAS

Type	Start	End	Confidence
Signal Peptide	1	20	0.68
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	263	0.99