YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|74488072, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKRLTIFSF LLIFTLIFAG CSNKKESNAK KDGKLTVYTT IFPLADFAKK IGGDYVNVEA  60
   61 IYPPGADSHT FEPSQKQTVQ VAKANLFVYN GAELEPFAEK MEKTLQKENV KIVNASKGIE 120
  121 LRASTEEEHH DHGDGHKEDE HHHDKDPHVW LDPTLAMKQA EKIKNALVEL QPEHKQEFEK 180
  181 NFAALQTKFT DLDDQFKAAV ANAKTKEILV SHAAYGYWEQ RYGLKQIPIA GISASDEPSQ 240
  241 KQLADITKTV KEHSLKYILF ETFSTPKVAS VIQKETGTKV LRLNHLATIS EDDAKNNKDY 300
  301 FTLMEENVNT LKEATN

Type	Start	End	Confidence
Signal Peptide	1	21	0.97
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	316	0.99