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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|85836069, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFSLPFADK LPKIPNRAMP AIGAPVMVLA TLAMVVLPIP AFLLDMFFTF NIALSMVVLL  60
   61 VSVYTRRPLD FAAFPTVLLI ATLLRLALNV ASTRVVLLHG HEGGDAAGNV IEAFGNVVIG 120
  121 GNYAVGLVVF LILMIINFMV VTKGAGRISE VSARFTLDAL PGKQMAIDAD LNAGLIDQDQ 180
  181 ARTRRFEVTK EADFYGSMDG ASKFVKGDAI AGILILFINI IGGLSIGMAQ FDLGFGEAIE 240
  241 IYTLLTIGDG LVAQIPSLLL SIAAAMMVTR QNTDEDMGEQ LVFQMFDNPK ALMITAAILG 300
  301 IMGIVPGMPH FSFLSLAVVA GAGAYFIDKK NKAKVEEKNL PATANANGDK PASQKELSWD 360
  361 DVQPVDIIGL EVGYRLIPLV DRDQGGELLE RVKGVRKKLS QDFGFLIPAV HIRDNLELTP 420
  421 NSYRITLMGV AVGEAEIKPD MELAINPGQV YGMIDGEPTI DPAFGLEAVW IREEQREHAQ 480
  481 ALGYTVVDSS TVLATHLSQQ LTNNASQLIG HEEVQNLLEM LSRSTPKLVE GFVPDQLQLG 540
  541 VVVKVLQNLL NEAIPIRDIR TIVQTLSEYS SKSQEPDILT AAVRISLKRL IVQEINGIEP 600
  601 ELPVITLIPE LEQILHQTMQ ASGGESAGIE PGLAERLQTS LSNATQEQEL KGEPAVLLTS 660
  661 GVLRSTLAKF VKNTIPSLRV LSYQEIPDEK QIRIVQAVGN 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle