YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|86146011, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKAIPLTIAA LSIVSYTASS AEDTTHIKLA TTTSTYHSGL LDYLLPEFEK DSGIKVDVLA  60
   61 AGTGKSLRMG ENGDVDLVMT HAPKAEANFV EKGYGVLPRK LMYNDFVIVG PQSDPAKIES 120
  121 QKAVADVFKA IANNNVTFVS RGDDSGTHKK EMGIWAQTKM EPNFGGYRSV GQGMGPTLNM 180
  181 ASEMQGYTMT DRGTWLAYQN KLDLKVLFQG DKNLFNPYQV ILVNPERYPS INYQAAKVFS 240
  241 DWLVNPKGQK LINDFKLHGK QLFVANAE

Type	Start	End	Confidence
Signal Peptide	1	21	0.97
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	268	0.99