YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|228855120, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIKLKKKRI ISVLLAITLV AIGYYMFQSI TNPKLVNEEE GNSVQQVSSL PKNELKKPIP  60
   61 NRFDGKERKV AYLTFDDGPG KYTANLLDVL KKNDVKATFF LIGDNVKRFP DLVKREHVEN 120
  121 HYVGMHSMTH DFKNLYTNQE YVKEMKEDQS LIRNVIGNSP KLTRPPYGSM PGLNESLRNE 180
  181 VVRNNLKVWD WTIDSLDWKY NKLPVDVAAA KIVQNVLAGA TSSKEIVLMH DIHPQSVAAV 240
  241 PAIIKGLREK GYEFEAYDEN NHFPINFWHD SRI

Type	Start	End	Confidence
Signal Peptide	1	23	0.63
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	273	0.99