YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|75762798, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.79
Topology Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLTMKDVIRE GDPILRNVAE DVSLPASEKD TTTLKEMIEF VINSQDPEMA EKYSLRPGIG  60
   61 LAAPQIGVSK KMIAVHVTDA DGTLYSHALF NPKIISHSVE RTYLQGGEGC LSVDREVPGY 120
  121 VPRYTRITVK ATSINGEEVK LRLKGLPAIV FQHEIDHLNG VMFYDHINKE NPFAAPDDSK 180
  181 PSRAIIIKRR KLIFRLFIMK WVPYSLIAIQ PTLVHDIYRL H

Type	Start	End	Confidence
Cytoplasmic	1	191	0.78
Transmembrane Helix	192	214	0.68
Non-Cytoplasmic	215	221	0.89