YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|86143662, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSVLSLCIA SLFFVACNQD LKTEEAATAE TPNQQEFAII IHGGAGTILK KNMTDSMEQA  60
   61 YKAKLTEAIK TGHEILKNGG SSLEAVQRTI NVMEDSPLFN SAKGAVFTHE GKNELDASIM 120
  121 DGATLNAGAV AGVTNVKNPI NLAYEVMTNS EHVLLSGKGA ETFAKEKGIE QVDPSYFFTQ 180
  181 RRYDGLQRIL EREKQDSISK ATAFYDPFIK DEKFGTVGCV ALDKNGNIAA GTSTGGMTNK 240
  241 RYNRIGDSPI IGSGTYANNA TCGVSSTGWG EYFIRGQVAY DISAQMEYAE KTLTDATQNV 300
  301 IQEKLTKLGG TGGIVALDHY GNPSMEFNTE GMYRAYMNDQ GELTLGIYKE NEN

Type	Start	End	Confidence
Signal Peptide	1	19	0.97
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	353	0.99