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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|86143366, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQKRIADFLF STRLMAVLFI VYAVAMATGT ILDAGQETSP TPYTRELVYE VWWFELIHIL  60
   61 FIINFIGNIW TFRLWRKEKW STLVFHAAFI LIIFGAAWTR YVGFEGVMPI REGETQNTFL 120
  121 TEKTYLNVFI DGERDGAPMR RKLEPKRLNL STRLDNSFTW ETDFDGKPVS ISFSKFIDGA 180
  181 EEGLIESTDG KAQLKIVEAG DGQRHEHYLE DGTVASIHNM LFALNKPTEG AINIGYDGEN 240
  241 YTINTPFEGS TRVMATQTDY EVAKDSVQEL KLRALYQLGG MQFVIPDPVI KGKNGIVEAF 300
  301 PKQKGQQDAL FVTITTAEGQ ETVGLLGGKG FNNEMVSTDV GDLKFHMAYG SLAEELPFSI 360
  361 KLKDFIAERY PGTTNAYSSY ESKVTVIDGP QQSFEYDIYM NHVLDHQGYR FFQASFDPDE 420
  421 LGTVLSVNHD MVGTWITYIG YFLLYLGLMI ILFDKGSRFG DLKVRLDKVK ARKAKLSAVI 480
  481 ALIAFSGMQL QAQEQEVIVE NGNTEIVEEQ PEDFIPGSAT VVEEQQHTLP TAQQIDSMLT 540
  541 ANKVPAEEAA KFGKLVIQDD GGRMMPVNTF SSKLLRKLSR SDTYEGLTAD QVFLSMVETP 600
  601 FFWYNVDLIY VKPANDSLRG IIGVPKEQKY LSALDFIDDM GRNKLDPYIT AAYQAEVKNS 660
  661 FDKDFIDIAE RLGLLNRAVS GEILKIFPLI NDENNKWVSY PELNESGYKG MDSLYTKQIL 720
  721 PLYFSALREG KETGDFSKAD TFLNSIKSFQ EKYGSEVMPS ENKIDAEVFY NKHDIFTKLY 780
  781 WMYLLASIVM FVFVIIRIFK DNRFIKTMVR LSGLAVGILF ALHTAGLIWR WYISGHAPWS 840
  841 DAYESILYVG WATMFFGLAF GRKSSLTIAS TAFVAGFILW GASMNWLNPA ISNLQPVLDS 900
  901 YWLMIHVAVI VASYGPFTLG MILGIVSLLL MLLTNSKNKK RMDLNIKELT IINEMALTVG 960
  961 LVMLTIGNFL GGQWANESWG RYWGWDPKET WALISIMVYA FVIHMRLVPG LRGRWFFNLM1020
 1021 SILAYGSILM TYFGVNFWLS GLHSYASGDN ILNLNKAIGI FAGVIVFALI AYPKYKKFYK1080
 1081 K

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