YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|228855035, gi...
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKEGQASLFF YLKEGGKNVD RIDVVAKVFI ATFGGFCGYF LGGWDATLKI LVTMAVIDYV  60
   61 TGMIAAGYNG ELKSKVGFKG IAKKVVLFLL VGAAAQLDAA LGSNSAIREA TIFFFMGNEL 120
  121 LSLLENAGRM GIPLPQALTN AVEILGGKQK QEEKKGDVQ

Type	Start	End	Confidence
Cytoplasmic	1	23	0.88
Transmembrane Helix	24	43	0.88
Non-Cytoplasmic	44	49	0.77
Transmembrane Helix	50	70	0.87
Cytoplasmic	71	84	0.76
Transmembrane Helix	85	102	0.77
Non-Cytoplasmic	103	159	0.60