YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|75761698, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTFCYVNAYL VTYILYNKGT KSKEVAKMST KKVYSFLSQA FIFSAIMLIS NIIATHLPIP  60
   61 MPSSVIGLVI LFSLLCLKVI KLEQVESLGT ALTGIIGFLF VPSGISVINS LGVMGQYFVQ 120
  121 ILTVIVVATV ILLAVTGLFA QFILGKDEKE TEDTKELKVV NKGRKHGKVA

Type	Start	End	Confidence
Cytoplasmic	1	32	0.98
Transmembrane Helix	33	54	0.91
Non-Cytoplasmic	55	60	0.69
Transmembrane Helix	61	80	0.92
Cytoplasmic	81	87	0.87
Transmembrane Helix	88	111	0.87
Non-Cytoplasmic	112	118	0.76
Transmembrane Helix	119	140	0.92
Cytoplasmic	141	170	0.94