YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|74490823, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVEMKHLLKI IMVMTLTGFM SGCSELEEIE ERGFVVGAAY DIVKEKKANP IMKGTYQMVL  60
   61 PSKLAQQGGQ GDGDGENYIN VSAKADSVFE QIRIIAKKIS RTLFFPHIQV IIFSEELLSH 120
  121 PYILQNTLDV YIRDHEMRRN IRLFVSKKNA ESILKQSAKP ENLPAQYIDM LAEHPPKNAQ 180
  181 MIEAARIGEV QEKMISNRSF VLPILELTKQ GVQMDGAALF RGKDNKCVGN LSGEETLGMN 240
  241 YIIGKKIGGF FTIRKKDQLI TYEIHKLRRK IKVSTTNATK PKFNIHLSLE GTIAELHFSD 300
  301 HKKVLNEKRL EKDISEEMEK RIQKSIKLVQ KKYKVDVLEL GEVYKRHNYK EWKKVSKNWD 360
  361 QGENYFSKAE ITVHVHPTIE HSGSALPKRV K

Type	Start	End	Confidence
Signal Peptide	1	24	0.50
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	391	0.99