YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|228854586, gi...
Protein type:	Transmembrane
Type Confidence:	0.77
Topology Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLKLVGIFS CVIMMLGIFI IYTNQSIGKE PDKTNYESRE NSINKEKDSR GKGQSKYNES  60
   61 SFASIQAVVN KEYGLPEDYK PEDLVVPNVP FSFSGTVEKS HLRKEAAEAL EKLFDLAKQE 120
  121 GIQLNAVSGF RSYDYQQRLY ANNVKRKGQE HTDRFSAKPG HSEHQTGLTM DVSSKSANNE 180
  181 LELSFANTKE GKWLKENAHR AGFIIRYPKG KESITGYAYE PWHIRYVGDI AENIYEQKQT 240
  241 LEEYMNL

Type	Start	End	Confidence
Cytoplasmic	1	4	0.68
Transmembrane Helix	5	23	0.72
Non-Cytoplasmic	24	247	0.94