YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|75762632, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRKVFLYEI ESICVAFLPI IWLNRYYIYL KGENAMEHHT SVLSLMVIVA IAFFVPLLLQ  60
   61 RFKLKALPVV VAEIIAGIFV GKSGFNIIEP DIWLQVLSTL GFIFLMFLSG LEIDFSIFKQ 120
  121 KGKKNTTNEP NTFQAASIIF LFIFILSYAL SLLFVWLGFV DNAMFMTLII STISLGVVVP 180
  181 TLKENNLGKT AIGQIILLVA VIADLVTMIL LAVFVGLNSE SGQSMWLLLL LFGAGIVIYF 240
  241 IAKRFKNIPY LDSLKAGSVQ IDTRAVFALI LILVGLSESV GAENILGAFL AGVLVSLLSP 300
  301 NEDMVEKLDS IGYGFFIPIF FVMVGVNLEV WSIFKEPSSM LMIPILIVGL FISKLLPSLV 360
  361 LRKWYPRNIV LGSAILLTST LSLVIAAAQI GEKLGIISPS LSASLILSAV ITCIFAPILF 420
  421 KKMFPKVETP KPKVAIIGAS RITLPLSLDL KREDYDVTLY MMRQNKINDE EAKSHDFPIV 480
  481 KLDDITIASL TEQTAFDADR VVVATSDDEQ NLLLAEHAKE LGVEHVIASV EDPLLQEKAT 540
  541 QEHIAVFSTI NSTRILLRAL IDKPSLVRLI TTANETVREV ELRSNKYNGI ALRRLPFLGD 600
  601 VLVIQIYRGN KALIPHGDTR LQHGDTLLVT GSKEHIDTLK NILE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle