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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|74490238, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKLTAVVAP VLAMSMALTA CSTSGGDKKT STNSSSGGDS KSGEKLATKQ VLNRTVTQEI  60
   61 PTMDSSKSTD TVSSQMLGNT MEGLYRLDKD NKPIPAAAES STKSEDGKKY TFKLRKDAKW 120
  121 SNGDPVTAKD FVYAWQRLLD PKTAAEYAFI AFPIKNAEVV NKGEKPVTEL GVKAVDDLTL 180
  181 EVELEQAVPY FLNLVAFPSY YPLNEKFVKE KGEKFGLEAD TTVYNGPFVL KDWKHEQGWQ 240
  241 LKKNDQYWDK KTVKLEEVNF SVVKEAATLV NLYDSGQVDF ALLNGEFVDK YRSKKDEFGT 300
  301 YSQVSTYFIR MNQKRDGQDT PLKSKKLREA IALSIDKKNL ANVILNDGSK EADFLVPKGL 360
  361 ATGPDGKDFQ ETFKNGLKPN SKKAAAAWEE AKKELGKDQV TIEFLNYDTG NAKKVGEYIK 420
  421 DQIEKNLKGV TVNIKLQPFK QKLKLETEQQ YDISYGGWNP DYADPMTFLD MFETGHSHNQ 480
  481 MSFSDPKYDG MVKKAGTELM SDAKKRWEEL GKAEKTLLEE DVAIVPLYQR GDSYVLQPNV 540
  541 KGVVKHNISP EFSFKWAYVT EK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle