YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|74490368, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGEKKMEKTK RKLILLICIS VFSLTGCLQK NIIDDVQLIQ GAAFDTAKDN KVKVTFVCPI  60
   61 QKKGNKVQVY EGTGNAVKQV KADTSLESSQ PFASGQMRVA LFTTKIAKKG LSTSFDTLIR 120
  121 DVNIGNSLYV GLLEGSGTEL FKGKYSTSYN VAIYIKKMLE HNMDTGPLPT DNLYLGAFRY 180
  181 YREGQDSYMP ILKKHGDKIK ITGIGLLKKD KLVGTIKYHD MFVFKGLLEK HRLDSHEFKT 240
  241 NPGYAMINNI RSVPTYEVNI KDGKPSFYIH VKMDARIQEL SRKFNLENKK NTTKIAKSIE 300
  301 KQLDAKATKL IKQFKSLNVD PLALGAKYRQ HYRPFKLEEW RQMYKDVPVH IKYTVNITNS 360
  361 GVIE

Type	Start	End	Confidence
Signal Peptide	1	29	0.96
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	364	0.99