YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|86142279, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLNKNLLVV PVVLGMALSM VNCKNEPKKE ETAVVAEMPE ATITKSDFGM TPDSIAVEKY  60
   61 SLVNANGMEV DIITYGGIIT SLKAPSQDST FQDVVLGYDT LEEYTTTGNP TFFGALIGRY 120
  121 GNRIANGKFS IDGEEYQLPT NDGPNSLHGG KGFDKVVWTA EEIEDGDNVG LKLTYTSPDG 180
  181 DQGYPGNLET TVTYTLLADN TLKVDYEATT DKTTVVNLTQ HSYFNLSGDF DNTILDTEVM 240
  241 LNADQYLPVD ETLIPTGELR AVEGTPFDFR EAKAIGAEIE AENDQLKKGQ GYDHCWVLND 300
  301 ESGAMHLAAT AYDPRSGRFL EVMTTEPAIQ FYTGNFLDGT LPQKGGEGTY ALRSGFCLET 360
  361 QHYPDSPNQS EFPSTLLKPG ETYNTTTSFK FSVK

Type	Start	End	Confidence
Signal Peptide	1	23	0.98
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	394	0.99