YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|67938827, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKHRQFAIVL AALMTLSVFT SCSKEGSEAA GTQVVTEKSV KGEDMQYKSL SSEEERVIVK  60
   61 KGTEMPFSGK YFNHKEDGTY TCKRCDAPLF RSSDKFDSGT GWPSFDDEIP GAVKKETDAD 120
  121 GRRTEIICAN CGAHLGHVFY NEGMTDKNAR YCVNSISLDF KDEGASDADA VGITQKAVFA 180
  181 GGCFWGVEYH FQKVAGVKSV TSGYTGGSKT DPTYKEVCTG TTGHAEAVEV EYDPSQTSYE 240
  241 ELAKLFFEIH DPTQLNRQGP DRGTQYRSAV FYADEEQKNI AQKLIAELKS NGYKVVTELE 300
  301 PASEFYPAED YHQDYYEKTG HQPYCHIYEK RFDK

Type	Start	End	Confidence
Signal Peptide	1	22	0.99
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	334	0.99